Links between gut microbiota with specific serum metabolite groups in pregnant women with overweight or obesity
Summary
other
Leo Lahti
About
Computational scientist obsessed with quantitative analysis of complex natural and social systems, and advancing open scholarship. We do data analysis, modeling and simulations, with a particular focus on microbial and societal ecosystems.
Work
University of Turku
|Associate Professor
Finland
→
Education
Aalto University
Finland
→
Doctor of Science in Technology
University of Helsinki
Finland
→
Bachelor of Science / Practical Philosophy
Helsinki University of Technology
Finland
→
Master of Science in Technology
Publications
Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Published by
Nutrients
Summary
journal-article
Linking Statistical and Ecological Theory: Hubbell's Unified Neutral Theory of Biodiversity as a Hierarchical Dirichlet Process
Summary
journal-article
Learning and teaching biological data science in the Bioconductor community
Summary
other
Laki estää tehokkaiden tutkimusmenetelmien käytön
Summary
other
International Campaign to Abolish Nuclear Weapons (ICAN). Public appeal to the Finnish parliament to join the United Nations international agreement to ban nuclear weapons. Signed together with 121 Finnish influencers in research, culture and politics. January 2021.
Summary
other
Interdisciplinary collaboration in studying newspaper materiality
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Interdisciplinary collaboration in studying newspaper materiality
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Integrating open science in the humanities: the case of computational history
Summary
other
Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Published by
Nutrients
Summary
journal-article
Integrating open science in the humanities: the case of computational history
Summary
other
Integrating open science in the humanities: the case of computational history
Summary
other
Gut microbiota-derived extracellular vesicles form a distinct entity from gut microbiota
Summary
other
Gut microbiota composition is associated with temperament traits in infants
Summary
journal-article
Gut Microbiota and Host Gene Mutations in Colorectal Cancer Patients and Controls of Iranian and Finnish Origin
Summary
journal-article
Gut Microbiota Composition in Mid-Pregnancy Is Associated with Gestational Weight Gain but Not Prepregnancy Body Mass Index
Summary
journal-article
Gut Microbiome as a Risk Factor for Future CKD
Summary
other
Fractional modelling of COVID-19 transmission incorporating asymptomatic and super-spreader individuals
Summary
other
A Quantitative Approach to Book-Printing in Sweden and Finland, 1640–1828
Published by
Historical Methods: A Journal of Quantitative and Interdisciplinary History
Summary
journal-article
A Quantitative Approach to Book-Printing in Sweden and Finland, 1640–1828
Published by
Historical Methods: A Journal of Quantitative and Interdisciplinary History
Summary
journal-article
Bibliographic Data Science and the History of the Book (c. 1500–1800)
Summary
journal-article
Fermented foods affect the seasonal stability of gut bacteria in an Indian rural population
Summary
other
Microbiome data science
Summary
other
FdeSolver: A Julia Package for Solving Fractional Differential Equations
Summary
other
Examining the healthy human microbiome concept
Summary
other
Examining the Early Modern Canon: The English Short Title Catalogue and Large-Scale Patterns of Cultural Production
Summary
other
Reply to the Letter to the Editor: Gut microbiota composition is associated with temperament traits in infants
Summary
other
Chronological age estimation from human microbiomes with transformer-based Robust Principal Component Analysis
Summary
other
COMPREHENSIVE BIOMARKER PROFILING OF HYPERTENSION IN 36,985 FINNISH INDIVIDUALS
Summary
other
Breast Milk Proteome: Changes in the Different Stages of Lactation and Impacts of Gestational Diabetes Mellitus and Body Mass Index
Summary
other
A Hierarchical Ornstein-Uhlenbeck Model for Stochastic Time Series Analysis
Published by
Lecture Notes in Computer Science
Summary
conference-paper
A Hierarchical Ornstein-Uhlenbeck Model for Stochastic Time Series Analysis
Published by
Lecture Notes in Computer Science
Summary
conference-paper
Best practices in bibliographic data science
Summary
other
Microbial communities as dynamical systems
Published by
Current Opinion in Microbiology
Summary
other
Microbial communities as dynamical systems
Published by
Current Opinion in Microbiology
Summary
other
Microbial communities as dynamical systems
Published by
Current Opinion in Microbiology
Summary
other
Associations between gut microbiome and circulating cytokines: a cross-sectional analysis in the FINRISK 2002 population cohort
Summary
other
Association between butyrate-producing gut bacteria and the risk of infectious disease hospitalisation : results from two observational, population-based microbiome studies
Summary
other
Open Data Science
Summary
other
Assessing the safety of microbiome perturbations
Summary
other
Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies
Summary
other
Analytical determination of editions from bibliographic metadata
Published by
Studia Humaniora Ouluensia
Summary
conference-paper
Multi-stability and the origin of microbial community types
Summary
journal-article
Analytical determination of editions from bibliographic metadata
Published by
Studia Humaniora Ouluensia
Summary
conference-paper
Alchemy & algorithms: perspectives on the philosophy and history of open science
Published by
Research Ideas and Outcomes
Summary
other
Alchemy & algorithms: perspectives on the philosophy and history of open science
Summary
other
A National Public Sphere? Analyzing the Language, Location, and Form of Newspapers in Finland, 1771–1917
Summary
journal-article
Comparative gut microbiota and resistome profiling of intensive care patients receiving selective digestive tract decontamination and healthy subjects
Summary
journal-article
Epidemic transmission modeling with fractional derivatives and environmental pathogens
Summary
other
Associations between gut microbiota and incident fractures in the FINRISK cohort
Summary
other
Multikingdom oral microbiome interactions in early-onset cryptogenic ischemic stroke
Summary
other
A concept for international societally relevant microbiology education and microbiology knowledge promulgation in society
Summary
other
Association of Long-Term Habitual Dietary Fiber Intake since Infancy with Gut Microbiota Composition in Young Adulthood
Summary
other
Bone marrow metabolism is affected by body weight and response to exercise training varies according to anatomical location
Summary
other
Fecal microbiota profiles of growing pigs and their relation to growth performance
Summary
other
Fewer culturable Lactobacillaceae species identified in faecal samples of pigs performing manipulative behaviour
Summary
other
Greengenes2 unifies microbial data in a single reference tree
Summary
journal-article
Integration of polygenic and gut metagenomic risk prediction for common diseases
Summary
other
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development
Summary
other
Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort
Summary
other
Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study
Summary
other
A toolbox of machine learning software to support microbiome analysis
Summary
other
Aberrations in the early pregnancy serum metabolic profile in women with prediabetes at two years postpartum
Summary
other
Ebola epidemic model with dynamic population and memory
Summary
other
Gut microbiome and atrial fibrillation: results from a large population-based study
Summary
other
Gut microbiota composition and function in pregnancy as determinants of prediabetes at two-year postpartum
Summary
other
Maternal microbiota communicates with the fetus through microbiota-derived extracellular vesicles
Summary
other
The gut microbiome is a significant risk factor for future chronic lung disease
Summary
other
What are patterns of rise and decline?
Summary
other
Distinct Diet-Microbiota-Metabolism Interactions in Overweight and Obese Pregnant Women: a Metagenomics Approach
Summary
journal-article
Enhancing biomarkers with co-abundance
Summary
other
Gut Microbiome Composition Is Predictive of Incident Type 2 Diabetes in a Population Cohort of 5,572 Finnish Adults
Summary
journal-article
microbiome R package (v.3.5)
Summary
other
Wrangling with non-standard data
Summary
other
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy
Summary
other
Potential pathobionts in vaginal microbiota are affected by fish oil and/or probiotics intervention in overweight and obese pregnant women
Summary
journal-article
Probabilistic Multivariate Early Warning Signals
Summary
other
The Anatomy of eighteenth Century Collections online (eCCO)1
Summary
journal-article
Effects of Obesity and Exercise on Hepatic and Pancreatic Lipid Content and Glucose Metabolism : PET Studies in Twins Discordant for BMI
Summary
other
Author Correction: Greengenes2 unifies microbial data in a single reference tree (Nature Biotechnology, (2023), 10.1038/s41587-023-01845-1)
Summary
other
Digitaaliset ihmistieteet ja historiantutkimus
Summary
other
Corpus Linguistics and Eighteenth Century Collections Online (ECCO)
Summary
journal-article
Probabilistic analysis of early modern British book prices
Summary
other
Quantifying bias and uncertainty in historical data collections with probabilistic programming
Summary
other
Reconstructing intellectual networks: From the ESTC’s bibliographic metadata to historical material
Summary
other
Retrieval and Analysis of Eurostat Open Data with the eurostat Package
Summary
journal-article
Exit time as a measure of ecological resilience
Summary
journal-article
Association of leisure time physical activity with gut microbiota composition in early adulthood
Summary
other
Variation and prognostic potential of the gut antibiotic resistome in the FINRISK 2002 cohort
Summary
other
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action
Summary
other
Associations of alcohol with the human gut microbiome and prospective health outcomes in the FINRISK 2002 cohort
Summary
other
Elementary methods provide more replicable results in microbial differential abundance analysis
Summary
other
Skin microbiota variation in Indian families
Summary
other
Modelling spatial patterns in host-associated microbial communities
Summary
other
Maternal pre- and postnatal stress and maternal and infant gut microbiota features
Summary
other
Infant gut microbiota and negative and fear reactivity
Summary
other
Gender differences in global antimicrobial resistance
Summary
other
Gut microbiome-derived bacterial extracellular vesicles in patients with solid tumours
Summary
other
Perinatal depressive and anxiety symptoms are associated with gut microbiota in pregnant women with overweight and obesity
Summary
other
Taxonomic signatures of cause-specific mortality risk in human gut microbiome
Summary
journal-article
A cohort study in family triads : impact of gut microbiota composition and early life exposures on intestinal resistome during the first two years of life
Summary
other
iSEEtree: interactive explorer for hierarchical data
Summary
other
Regular Exercise Training Induces More Changes on Intestinal Glucose Uptake from Blood and Microbiota Composition in Leaner Compared to Heavier Individuals in Monozygotic Twins Discordant for BMI
Summary
other
Algorithm 1047: FdeSolver, a Julia Package for Solving Fractional Differential Equations
Summary
other
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Summary
working-paper
The Emerging Paradigm of Bibliographic Data Science
Summary
other
Maternal prenatal psychological distress and hair cortisol levels associate with infant fecal microbiota composition at 2.5 months of age
Summary
journal-article
The Emerging Paradigm of Bibliographic Data Science
Summary
other
Stool Microbiota Composition Differs in Patients with Stomach, Colon, and Rectal Neoplasms
Published by
Digestive Diseases and Sciences
Summary
journal-article
Stool Microbiota Composition Differs in Patients with Stomach, Colon, and Rectal Neoplasms
Summary
journal-article
Scaling up bibliographic data science
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Scaling up bibliographic data science
Published by
CEUR Workshop Proceedings
Summary
conference-paper
Diet, perceived intestinal well-being and compositions of fecal microbiota and short chain fatty acids in oat-using subjects with celiac disease or gluten sensitivity
Summary
journal-article
Print culture and economic constraints : A quantitative analysis of book prices in eighteenth-century Britain
Summary
other
Prebiotic Xylo-oligosaccharides Targeting Faecalibacterium prausnitzii Prevent High Fat Diet-induced Hepatic Steatosis in Rats
Summary
working-paper
Opening academic publishing - Development and application of systematic evaluation criteria
Summary
report
Opening academic publishing - Development and application of systematic evaluation criteria
Summary
report
Role of Gut Microbiota in Statin-Associated New-Onset Diabetes—a Cross-Sectional and Prospective Analysis of the FINRISK 2002 Cohort
Summary
other
Gut microbiota-derived extracellular vesicles form a distinct entity from gut microbiota
Published by
mSystems
Summary
journal-article
Skin microbiota variation in Indian families
Published by
PeerJ
Summary
journal-article
Associations of alcohol with the human gut microbiome and prospective health outcomes in the FINRISK 2002 cohort
Published by
European Journal of Nutrition
Summary
journal-article
Associations of alcohol with the human gut microbiome and prospective health outcomes in the FINRISK 2002 cohort
Published by
European Journal of Nutrition
Summary
journal-article
Biome-specific genome catalogues reveal functional potential of shallow sequencing
Summary
preprint
Elementary methods provide more replicable results in microbial differential abundance analysis
Published by
Briefings in Bioinformatics
Summary
journal-article
Lifestyle associates with unique resistome and microbiome signatures in children
Summary
preprint
Skin microbiota variation in Indian families
Published by
PeerJ
Summary
journal-article
Variation and prognostic potential of the gut antibiotic resistome in the FINRISK 2002 cohort
Published by
Nature Communications
Summary
journal-article
Reconstructing ecological community dynamics from limited observations
Published by
ArXiv
Summary
journal-article
Perinatal depressive and anxiety symptoms are associated with gut microbiota in pregnant women with overweight and obesity
Published by
Brain, Behavior, & Immunity Health
Summary
journal-article
Gut microbiome-derived bacterial extracellular vesicles in patients with solid tumours
Published by
Journal of Advanced Research
Summary
journal-article
Gender differences in global antimicrobial resistance
Published by
Npj Biofilms and Microbiomes
Summary
journal-article
Elementary methods provide more replicable results in microbial differential abundance analysis
Summary
other
Fractional modelling of COVID-19 transmission incorporating asymptomatic and super-spreader individuals
Published by
ArXiv
Summary
journal-article
Examining the healthy human microbiome concept (Oct, 10.1038/s41579-024-01107-0, 2024)
Published by
Nature Reviews Microbiology
Summary
journal-article
Assessing the safety of microbiome perturbations
Published by
Microbial Genomics
Summary
journal-article
Association of leisure time physical activity with gut microbiota composition in early adulthood
Published by
Scientific Reports
Summary
journal-article
Maternal pre- and postnatal stress and maternal and infant gut microbiota features
Published by
Psychoneuroendocrinology
Summary
journal-article
iSEEtree: interactive explorer for hierarchical data
Published by
Bioinformatics Advances
Summary
journal-article
Examining the healthy human microbiome concept
Published by
Nature Reviews Microbiology
Summary
journal-article
Maternal pre- and postnatal stress and maternal and infant gut microbiota features
Published by
Psychoneuroendocrinology
Summary
journal-article
Fermented foods affect the seasonal stability of gut bacteria in an Indian rural population
Published by
Nature Communications
Summary
journal-article
LimROTS: A Hybrid Method Integrating Empirical Bayes and Reproducibility-Optimized Statistics for Robust Analysis of Proteomics Data
Published by
BioRxiv
Summary
journal-article
Learning and teaching biological data science in the Bioconductor community
Published by
PLOS Computational Biology
Summary
journal-article
Fractional modelling of COVID-19 transmission incorporating asymptomatic and super-spreader individuals
Published by
Mathematical Biosciences
Summary
journal-article
Gut Microbiome as a Risk Factor for Future CKD
Published by
Kidney International Reports
Summary
journal-article
LimROTS: A Hybrid Method Integrating Empirical Bayes and Reproducibility-Optimized Statistics for Robust Differential Expression Analysis
Summary
preprint
Greengenes2 unifies microbial data in a single reference tree (Jul, 10.1038/s41587-023-01845-1, 2023)
Published by
Nature Biotechnology
Summary
journal-article
iSEEtree: interactive explorer for hierarchical data
Published by
Bioinformatics Advances
Summary
journal-article
Painting the Mona Lisa?
Published by
Septentrio Conference Series
Summary
journal-article
Effects of Obesity and Exercise on Hepatic and Pancreatic Lipid Content and Glucose Metabolism: PET Studies in Twins Discordant for BMI
Published by
Biomolecules
Summary
journal-article
Effects of Obesity and Exercise on Hepatic and Pancreatic Lipid Content and Glucose Metabolism: PET Studies in Twins Discordant for BMI
Published by
Biomolecules
Summary
journal-article
Association between butyrate-producing gut bacteria and the risk of infectious disease hospitalisation: results from two observational, population-based microbiome studies
Published by
The Lancet Microbe
Summary
journal-article
Regular Exercise Training Induces More Changes on Intestinal Glucose Uptake from Blood and Microbiota Composition in Leaner Compared to Heavier Individuals in Monozygotic Twins Discordant for BMI
Published by
Nutrients
Summary
journal-article
Biochemical analyses can complement sequencing-based ARG load monitoring: a case study in Indian hospital sewage networks
Summary
preprint
Infant gut microbiota and negative and fear reactivity
Published by
Development and Psychopathology
Summary
journal-article
Epidemic transmission modeling with fractional derivatives and environmental pathogens
Published by
International Journal of Biomathematics
Summary
journal-article
Associations between gut microbiota and incident fractures in the FINRISK cohort
Published by
npj Biofilms and Microbiomes
Summary
journal-article
Epidemic transmission modeling with fractional derivatives and environmental pathogens
Published by
International Journal of Biomathematics
Summary
journal-article
Associations between gut microbiota and incident fractures in the FINRISK cohort
Published by
Npj Biofilms and Microbiomes
Summary
journal-article
Multikingdom oral microbiome interactions in early-onset cryptogenic ischemic stroke
Published by
ISME Communications
Summary
journal-article
Multikingdom oral microbiome interactions in early-onset cryptogenic ischemic stroke
Published by
ISME Communications
Summary
journal-article
A concept for international societally relevant microbiology education and microbiology knowledge promulgation in society
Published by
Microbial Biotechnology
Summary
journal-article
Regular Exercise Training Induces More Changes on Intestinal Glucose Uptake from Blood and Microbiota Composition in Leaner Compared to Heavier Individuals in Monozygotic Twins Discordant for BMI
Published by
Nutrients
Summary
journal-article
Association of Long-Term Habitual Dietary Fiber Intake since Infancy with Gut Microbiota Composition in Young Adulthood
Published by
The Journal of Nutrition
Summary
journal-article
Associations between Stress Responses and Gut Microbiota Metabolites among Maternal Prenatal Psychological Distress Exposed Infants - FinnBrain Birth Cohort Study
Published by
Psychoneuroendocrinology
Summary
journal-article
Bone marrow metabolism is affected by body weight and response to exercise training varies according to anatomical location
Published by
Diabetes, Obesity and Metabolism
Summary
journal-article
Algorithm 1047: FdeSolver, a Julia Package for Solving Fractional Differential Equations
Published by
ACM Transactions on Mathematical Software
Summary
journal-article
Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort (vol 54, pg 134, 2022)
Published by
Nature Genetics
Summary
journal-article
Daily skin-to-skin contact alters microbiota development in healthy full-term infants
Published by
Gut Microbes
Summary
journal-article
Daily skin-to-skin contact alters microbiota development in healthy full-term infants
Summary
journal-article
Fecal microbiota profiles of growing pigs and their relation to growth performance
Published by
Plos One
Summary
journal-article
Fewer culturable <i>Lactobacillaceae</i> species identified in faecal samples of pigs performing manipulative behaviour
Published by
Scientific Reports
Summary
journal-article
Print culture and economic constraints: A quantitative analysis of book prices in eighteenth-century Britain
Published by
Explorations in Economic History
Summary
journal-article
Greengenes2 unifies microbial data in a single reference tree
Published by
Nature Biotechnology
Summary
journal-article
Integrating host genetic and gut metagenomic risk prediction for common diseases
Published by
European Journal of Human Genetics
Summary
journal-article
Integration of polygenic and gut metagenomic risk prediction for common diseases
Published by
Nature Aging
Summary
journal-article
A cohort study in family triads: impact of gut microbiota composition and early life exposures on intestinal resistome during the first two years of life
Published by
Gut Microbes
Summary
journal-article
Learning and teaching biological data science in the Bioconductor community
Published by
ArXiv
Summary
journal-article
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development
Published by
Nature Medicine
Summary
journal-article
Microbiome confounders and quantitative profiling challenge predicted microbial targets in colorectal cancer development
Published by
Nature Medicine
Summary
journal-article
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy (vol 7, pg e00167, 2023)
Published by
mSystems
Summary
journal-article
Role of Gut Microbiota in Statin-Associated New-Onset Diabetes-A Cross-Sectional and Prospective Analysis of the FINRISK 2002 Cohort
Published by
Arteriosclerosis, Thrombosis, and Vascular Biology
Summary
journal-article
Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study
Published by
Journal of Oral Microbiology
Summary
journal-article
Shotgun metagenomic analysis of the oral microbiome in gingivitis: a nested case-control study
Published by
Journal of Oral Microbiology
Summary
journal-article
Validating and Extracting Information from National Identification Numbers in R: The Case of Finland and Sweden
Published by
The R Journal
Summary
journal-article
Algorithm 1047: FdeSolver, a Julia Package for Solving Fractional Differential Equations
Published by
ACM Transactions on Mathematical Software
Summary
journal-article
A cohort study in family triads: impact of gut microbiota composition and early life exposures on intestinal resistome during the first two years of life
Published by
Gut Microbes
Summary
journal-article
What are patterns of rise and decline?
Published by
Royal Society Open Science
Summary
journal-article
Skin microbiota variation in Indian families
Summary
preprint
Impacts of maternal microbiota and microbial metabolites on fetal intestine, brain, and placenta
Summary
journal-article
Dealing with dimensionality: the application of machine learning to multi-omics data
Published by
Bioinformatics
Summary
journal-article
miaSim: an R/Bioconductor package to easily simulate microbial community dynamics
Published by
Methods in Ecology and Evolution
Summary
journal-article
Dealing with dimensionality: the application of machine learning to multi-omics data
Summary
other
What are patterns of rise and decline?
Published by
Royal Society Open Science
Summary
journal-article
Ebola epidemic model with dynamic population and memory
Published by
Chaos, Solitons & Fractals
Summary
journal-article
Ebola epidemic model with dynamic population and memory
Published by
Chaos, Solitons & Fractals
Summary
journal-article
Machine learning approaches in microbiome research: challenges and best practices
Published by
Frontiers in Microbiology
Summary
journal-article
Fractional model of COVID–19 with pathogens as shedding effects
Published by
ArXiv
Summary
journal-article
miaSim: an R/Bioconductor package to easily simulate microbial community dynamics
Summary
journal-article
miaSim: an R/Bioconductor package to easily simulate microbial community dynamics
Published by
Methods in Ecology and Evolution
Summary
journal-article
Gut microbiome and atrial fibrillation-results from a large population-based study
Published by
EBioMedicine
Summary
journal-article
Infant Left Amygdala Volume Is Negatively Associated with Fecal Microbiota Diversity
Published by
BioRxiv
Summary
journal-article
The gut microbiome is a significant risk factor for future chronic lung disease
Published by
Journal of Allergy and Clinical Immunology
Summary
journal-article
Gut microbiota composition and function in pregnancy as determinants of prediabetes at two-year postpartum
Published by
Acta Diabetologica
Summary
journal-article
The preterm gut microbiota and administration routes of different probiotics: a randomized controlled trial
Summary
journal-article
Gut microbiota composition and function in pregnancy as determinants of prediabetes at two-year postpartum
Published by
Acta Diabetologica
Summary
journal-article
Maternal microbiota communicates with the fetus through microbiota-derived extracellular vesicles
Published by
Microbiome
Summary
journal-article
Impacts of maternal microbiota and microbial metabolites on fetal intestine, brain, and placenta
Published by
BMC Biology
Summary
journal-article
Microbiome-based risk prediction in incident heart failure: a community challenge
Summary
other
A toolbox of machine learning software to support microbiome analysis
Published by
Frontiers in Microbiology
Summary
journal-article
Machine learning approaches in microbiome research: challenges and best practices
Summary
other
Aberrations in the early pregnancy serum metabolic profile in women with prediabetes at two years postpartum
Published by
Metabolomics
Summary
journal-article
The preterm gut microbiota and administration routes of different probiotics: a randomized controlled trial
Published by
Pediatric Research
Summary
journal-article
Skin microbiota variation in Indian families
Published by
BioRxiv
Summary
journal-article
Impacts of maternal microbiota and microbial metabolites on fetal intestine, brain, and placenta
Published by
BMC Biology
Summary
journal-article
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action
Published by
Frontiers in Microbiology
Summary
journal-article
Dealing with dimensionality: the application of machine learning to multi-omics data
Published by
Bioinformatics
Summary
journal-article
The impact of fish oil and/or probiotics intervention on vaginal microbiota in overweight and obese pregnant women
Published by
Annals of Nutrition and Metabolism
Summary
journal-article
Distinct Diet-Microbiota-Metabolism Interactions in Overweight and Obese Pregnant Women: a Metagenomics Approach
Published by
Microbiology Spectrum
Summary
journal-article
Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting
Published by
Cell Metabolism
Summary
journal-article
Early prediction of incident liver disease using conventional risk factors and gut-microbiome-augmented gradient boosting
Summary
journal-article
Skin microbiota diversity among genetically unrelated individuals of Indian origin
Published by
PeerJ
Summary
journal-article
Enhancing biomarkers with co-abundance
Published by
Nature Computational Science
Summary
journal-article
Enhancing biomarkers with co-abundance
Published by
Nature Computational Science
Summary
journal-article
Comprehensive biomarker profiling of hypertension in 36 985 Finnish individuals
Published by
Journal of Hypertension
Summary
journal-article
FdeSolver: A Julia Package for Solving Fractional Differential Equations
Published by
ArXiv
Summary
journal-article
Towards standardized and reproducible research in skin microbiomes
Published by
Environmental Microbiology
Summary
journal-article
Towards standardized and reproducible research in skin microbiomes
Published by
Environmental Microbiology
Summary
journal-article
Towards standardized and reproducible research in skin microbiomes
Summary
other
Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort
Published by
Nature Genetics
Summary
journal-article
Open science recommendation and checklist for research, development and innovation activities in collaboration between research organisations and companies
Summary
book
Gut Microbiome Composition Is Predictive of Incident Type 2 Diabetes in a Population Cohort of 5,572 Finnish Adults
Published by
Diabetes Care
Summary
journal-article
Can gut microbiota throughout the first 10 years of life predict executive functioning in childhood?
Summary
journal-article
Can gut microbiota throughout the first 10 years of life predict executive functioning in childhood?
Published by
Developmental Psychobiology
Summary
journal-article
Infant Fecal Microbiota Composition and Attention to Emotional Faces
Published by
Emotion
Summary
journal-article
Infant fecal microbiota composition and attention to emotional faces.
Published by
Emotion
Summary
journal-article
COMPREHENSIVE BIOMARKER PROFILING OF HYPERTENSION IN 36,985 FINNISH INDIVIDUALS
Published by
Journal of Hypertension
Summary
journal-article
An Infancy-Onset 20-Year Dietary Counselling Intervention and Gut Microbiota Composition in Adulthood
Summary
journal-article
Skin microbiota diversity among genetically unrelated individuals of Indian origin
Summary
journal-article
Multi-Trait Genetic Analysis Reveals Clinically Interpretable Hypertension Subtypes
Published by
Circulation: Genomic and Precision Medicine
Summary
journal-article
Multi-Trait Genetic Analysis Reveals Clinically Interpretable Hypertension Subtypes
Published by
Circulation: Genomic and Precision Medicine
Summary
journal-article
An Infancy-Onset 20-Year Dietary Counselling Intervention and Gut Microbiota Composition in Adulthood
Published by
Nutrients
Summary
journal-article
Multi-Trait Genetic Analysis Reveals Clinically Interpretable Hypertension Subtypes
Summary
journal-article
Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy
Published by
mSystems
Summary
journal-article
Rekommendation och checklista för öppen vetenskap inom ömsesidig forsknings-, utvecklings- och innovationsverksamhet mellan forskningsorganisationer och företag
Summary
book
An Infancy-Onset 20-Year Dietary Counselling Intervention and Gut Microbiota Composition in Adulthood
Published by
Nutrients
Summary
journal-article
The Anatomy of Eighteenth Century Collections Online (ECCO)
Published by
Eighteenth Century Studies
Summary
journal-article
Potential pathobionts in vaginal microbiota are affected by fish oil and/or probiotics intervention in overweight and obese pregnant women
Published by
Biomedicine & Pharmacotherapy
Summary
journal-article
An Infancy-Onset 20-Year Dietary Counselling Intervention and Gut Microbiota Composition in Adulthood
Published by
Nutrients
Summary
journal-article
Probabilistic Multivariate Early Warning Signals
Published by
Lecture Notes in Computer Science
Summary
journal-article
Probabilistic Multivariate Early Warning Signals
Summary
book-chapter
Impacts of maternal microbiota and microbial metabolites on fetal intestine, brain and placenta
Summary
preprint
Quantifying the impact of ecological memory on the dynamics of interacting communities
Published by
PLOS Computational Biology
Summary
journal-article
Quantifying the impact of ecological memory on the dynamics of interacting communities
Published by
PLOS Computational Biology
Summary
journal-article
Quantifying the impact of ecological memory on the dynamics of interacting communities
Summary
journal-article
Distinct Diet-Microbiota-Metabolism Interactions in Overweight and Obese Pregnant Women: a Metagenomics Approach
Published by
Microbiology Spectrum
Summary
journal-article
Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions
Published by
Frontiers in Microbiology
Summary
journal-article
Comprehensive biomarker profiling of hypertension in 36 985 Finnish individuals
Summary
journal-article
Quantifying the impact of ecological memory on the dynamics of interacting communities
Summary
preprint
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Published by
Frontiers in Microbiology
Summary
journal-article
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Published by
Frontiers in Microbiology
Summary
other
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Published by
Frontiers in Microbiology
Summary
other
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Published by
Frontiers in Microbiology
Summary
other
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment
Published by
Frontiers in Microbiology
Summary
other
Corpus Linguistics and Eighteenth Century Collections Online (ECCO)
Published by
Research in Corpus Linguistics
Summary
journal-article
Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes
Published by
Genome Research
Summary
journal-article
Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes
Summary
journal-article
Exit time as a measure of ecological resilience
Published by
Science
Summary
journal-article
Exit time as a measure of ecological resilience
Published by
Science
Summary
journal-article
Gut microbiota diversity but not composition is related to saliva cortisol stress response at the age of 2.5 months
Published by
Stress: the International Journal on Biology of Stress
Summary
journal-article
Gut microbiota diversity but not composition is related to saliva cortisol stress response at the age of 2.5 months
Published by
Stress
Summary
journal-article
Gut microbiota diversity but not composition is related to saliva cortisol stress response at the age of 2.5 months
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors
Published by
Gut Pathogens
Summary
journal-article
Impact of combined consumption of fish oil and probiotics on the serum metabolome in pregnant women with overweight or obesity
Published by
EBioMedicine
Summary
journal-article
Impact of combined consumption of fish oil and probiotics on the serum metabolome in pregnant women with overweight or obesity
Summary
journal-article
Links between gut microbiome composition and fatty liver disease in a large population sample
Published by
Gut Microbes
Summary
journal-article
Links between gut microbiome composition and fatty liver disease in a large population sample
Summary
journal-article
METABOLIC PROFILING OF HYPERTENSION IN 36,985 FINNISH INDIVIDUALS
Published by
JACC: Journal of the American College of Cardiology
Summary
journal-article
MULTI-TRAIT GENETIC ANALYSIS OF HYPERTENSION REVEALS CLINICALLY INTERPRETABLE SUBTYPES
Published by
JACC: Journal of the American College of Cardiology
Summary
journal-article
Modelling spatial patterns in host-associated microbial communities
Published by
Environmental Microbiology
Summary
journal-article
Modelling spatial patterns in host‐associated microbial communities
Published by
Environmental Microbiology
Summary
journal-article
Probabilistic early warning signals
Published by
Ecology and Evolution
Summary
journal-article
Probabilistic early warning signals
Published by
Ecology and Evolution
Summary
journal-article
Probabilistic early warning signals
Summary
journal-article
Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions
Published by
Frontiers in Microbiology
Summary
journal-article
Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions
Published by
Frontiers in Microbiology
Summary
journal-article
Systemic cross-talk between brain, gut, and peripheral tissues in glucose homeostasis: effects of exercise training (CROSSYS). Exercise training intervention in monozygotic twins discordant for body weight
Published by
BMC Sports Science, Medicine and Rehabilitation
Summary
journal-article
Systemic cross-talk between brain, gut, and peripheral tissues in glucose homeostasis: effects of exercise training (CROSSYS). Exercise training intervention in monozygotic twins discordant for body weight
Summary
journal-article
Targeting Gut Microbiota to Treat Hypertension: A Systematic Review
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Targeting Gut Microbiota to Treat Hypertension: A Systematic Review
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Targeting Gut Microbiota to Treat Hypertension: A Systematic Review
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Targeting Gut Microbiota to Treat Hypertension: A Systematic Review
Summary
other
Taxonomic signatures of cause-specific mortality risk in human gut microbiome
Published by
Nature Communications
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
Three-Species Lotka-Volterra Model with Respect to Caputo and Caputo-Fabrizio Fractional Operators
Published by
Symmetry
Summary
journal-article
UNSUPERVISED CLUSTER ANALYSIS OF HYPERTENSIVE INDIVIDUALS IDENTIFIES A ROBUST HIGH-RISK SUBGROUP
Published by
Journal of Hypertension
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Published by
International Journal of Environmental Research and Public Health
Summary
journal-article
Xylo-oligosaccharides in prevention of hepatic steatosis and adipose tissue inflammation: associating taxonomic and metabolomic patterns in fecal microbiomes with biclustering
Published by
Preprints.org
Summary
journal-article
Xylo-Oligosaccharides in Prevention of Hepatic Steatosis and Adipose Tissue Inflammation: Associating Taxonomic and Metabolomic Patterns in Fecal Microbiomes with Biclustering
Summary
other
Association Between the Gut Microbiota and Blood Pressure in a Population Cohort of 6953 Individuals
Published by
Journal of the American Heart Association
Summary
journal-article
Unsupervised hierarchical clustering identifies a metabolically challenged subgroup of hypertensive individuals
Published by
Journal of Clinical Hypertension
Summary
journal-article
Unsupervised hierarchical clustering identifies a metabolically challenged subgroup of hypertensive individuals
Published by
Journal of Clinical Hypertension
Summary
journal-article
Unsupervised hierarchical clustering identifies a metabolically challenged subgroup of hypertensive individuals
Published by
The Journal of Clinical Hypertension
Summary
journal-article
Three-species predator-prey model with respect to Caputo and Caputo-Fabrizio fractional operators
Published by
ArXiv
Summary
journal-article
Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Published by
Nutrients
Summary
journal-article
Prebiotic Xylo-Oligosaccharides Ameliorate High-Fat-Diet-Induced Hepatic Steatosis in Rats
Published by
Nutrients
Summary
journal-article
Partial restoration of normal intestinal microbiota in morbidly obese women six months after bariatric surgery
Summary
journal-article
Partial restoration of normal intestinal microbiota in morbidly obese women six months after bariatric surgery
Published by
PeerJ
Summary
journal-article
Linking statistical and ecological theory: Hubbell's unified neutral theory of biodiversity as a hierarchical Dirichlet process
Published by
ArXiv
Summary
journal-article
Intestinal microbiota analysis supports inclusion of gluten-free oats to diet of subjects with celiac disease or gluten sensitivity
Published by
Proceedings of the Nutrition Society
Summary
other
Intestinal microbiota analysis supports inclusion of gluten-free oats to diet of subjects with celiac disease or gluten sensitivity
Published by
Proceedings of the Nutrition Society
Summary
other
Intestinal microbiota analysis supports inclusion of gluten-free oats to diet of subjects with celiac disease or gluten sensitivity
Published by
Proceedings of the Nutrition Society
Summary
journal-article
Gut microbiota composition and saliva cortisol stress response at the age of 2.5 months
Published by
Psychoneuroendocrinology
Summary
journal-article
Eicosanoid Inflammatory Mediators Are Robustly Associated With Blood Pressure in the General Population
Published by
Journal of the American Heart Association
Summary
journal-article
Eicosanoid Inflammatory Mediators Are Robustly Associated With Blood Pressure in the General Population
Published by
Journal of the American Heart Association
Summary
journal-article
Eicosanoid Inflammatory Mediators Are Robustly Associated With Blood Pressure in the General Population
Published by
Journal of the American Heart Association
Summary
journal-article
Eicosanoid Inflammatory Mediators Are Robustly Associated With Blood Pressure in the General Population
Published by
Journal of the American Heart Association
Summary
journal-article
Diet, Perceived Intestinal Well-Being and Compositions of Fecal Microbiota and Short Chain Fatty Acids in Oat-Using Subjects with Celiac Disease or Gluten Sensitivity
Published by
Nutrients
Summary
journal-article
Diet, Perceived Intestinal Well-Being and Compositions of Fecal Microbiota and Short Chain Fatty Acids in Oat-Using Subjects with Celiac Disease or Gluten Sensitivity
Published by
Nutrients
Summary
journal-article
Diet, Perceived Intestinal Well-Being and Compositions of Fecal Microbiota and Short Chain Fatty Acids in Oat-Using Subjects with Celiac Disease or Gluten Sensitivity
Published by
Nutrients
Summary
journal-article
Association Between the Gut Microbiota and Blood Pressure in a Population Cohort of 6953 Individuals
Published by
Journal of the American Heart Association
Summary
journal-article
Association Between the Gut Microbiota and Blood Pressure in a Population Cohort of 6953 Individuals
Published by
Journal of the American Heart Association
Summary
journal-article
Infant fecal microbiota composition and attention to emotional faces
Published by
Emotion
Summary
journal-article
Infant fecal microbiota composition and attention to emotional faces
Published by
Emotion
Summary
journal-article
Maternal prenatal psychological distress and hair cortisol levels associate with infant fecal microbiota composition at 2.5 months of age
Published by
Psychoneuroendocrinology
Summary
journal-article
Scaling Up Bibliographic Data Science
Published by
Digital Humanities in the Nordic and Baltic Countries Publications
Summary
journal-article
Microbial communities in a dynamic in vitro model for the human ileum resemble the human ileal microbiota
Published by
FEMS Microbiology Ecology
Summary
journal-article
Microbial communities in a dynamic in vitro model for the human ileum resemble the human ileal microbiota
Published by
FEMS Microbiology Ecology
Summary
journal-article
Microbial communities in a dynamic in vitro model for the human ileum resemble the human ileal microbiota
Published by
FEMS Microbiology Ecology
Summary
journal-article
Interdisciplinary Collaboration in Studying Newspaper Materiality
Published by
Digital Humanities in the Nordic and Baltic Countries Publications
Summary
journal-article
Reconstructing Intellectual Networks
Published by
Digital Humanities in the Nordic and Baltic Countries Publications
Summary
journal-article
A Quantitative Approach to Book-Printing in Sweden and Finland, 1640–1828
Published by
Historical Methods: A Journal of Quantitative and Interdisciplinary History
Summary
journal-article
Bibliographic Data Science and the History of the Book (c. 1500–1800)
Published by
Cataloging & Classification Quarterly
Summary
journal-article
Microbiome data science
Published by
Journal of Biosciences
Summary
journal-article
Microbiome yarns: The Global Phenotype-Genotype Survey. Episode III: importance of microbiota diversification for microbiome function and biome health
Published by
Microbial Biotechnology
Summary
journal-article
Microbiome yarns: The Global Phenotype-Genotype Survey. Episode III: importance of microbiota diversification for microbiome function and biome health
Published by
Microbial Biotechnology
Summary
other
Microbiome yarns: The Global Phenotype-Genotype Survey. Episode III: importance of microbiota diversification for microbiome function and biome health
Published by
Microbial Biotechnology
Summary
other
Reply to the Letter to the Editor: Gut microbiota composition is associated with temperament traits in infants
Published by
Brain, Behavior, and Immunity
Summary
journal-article
Alchemy & algorithms: perspectives on the philosophy and history of open science
Published by
Research Ideas and Outcomes
Summary
journal-article
Microbiome Yarns: human biome reproduction, evolution and visual acuity
Published by
Microbial Biotechnology
Summary
journal-article
Open Data Science
Summary
book-chapter
Microbiome Yarns: human biome reproduction, evolution and visual acuity
Summary
other
Open Data Science
Published by
Lecture Notes in Computer Science
Summary
journal-article
A Hierarchical Ornstein-Uhlenbeck Model for Stochastic Time Series Analysis
Summary
book-chapter
Eicosanoid Variation is Strongly Related to Blood Pressure in the General Population
Published by
Circulation
Summary
journal-article
Microbial communities as dynamical systems
Published by
Current Opinion in Microbiology
Summary
journal-article
Signatures of ecological processes in microbial community time series
Summary
journal-article
Stability estimation of autoregulated genes under Michaelis-Menten-type kinetics
Summary
journal-article
A Hierarchical Ornstein-Uhlenbeck Model for Stochastic Time Series Analysis
Published by
Lecture Notes in Computer Science
Summary
journal-article
Alchemy & algorithms: perspectives on the philosophy and history of open science
Published by
Research Ideas and Outcomes
Summary
journal-article
Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies
Published by
FEMS Microbiology Reviews
Summary
journal-article
Multi-stability and the origin of microbial community types
Published by
The ISME Journal
Summary
journal-article
An Open Science Peer Review Oath
Summary
journal-article
Metagenomics meets time series analysis: unraveling microbial community dynamics
Published by
Current Opinion in Microbiology
Summary
journal-article
Fat, fibre and cancer risk in African Americans and rural Africans
Published by
Nature Communications
Summary
journal-article
Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river
Published by
Scientific Reports
Summary
journal-article
Improved taxonomic assignment of human intestinal 16S rRNA sequences by a dedicated reference database
Published by
BMC Genomics
Summary
journal-article
A novel atlas of gene expression in human skeletal muscle reveals molecular changes associated with aging
Published by
Skeletal Muscle
Summary
journal-article
A Quantitative Study of History in the English Short-Title Catalogue (ESTC), 1470-1800
Published by
LIBER Quarterly
Summary
journal-article
Fat, fibre and cancer risk in African Americans and rural Africans
Published by
Nature Communications
Summary
journal-article
COLONIC MICROBIOME-METABONOME NETWORK INTERACTIONS IN AFRICAN AMERICANS AND NATIVE AFRICANS: A PROSPECTIVE 2-WEEK FOOD EXCHANGE STUDY
Published by
Gut
Summary
journal-article
Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
Published by
The ISME Journal
Summary
journal-article
Copy Number Alterations and Neoplasia-Specific Mutations in MELK, PDCD1LG2, TLN1, and PAX5 at 9p in Different Neoplasias
Published by
Genes, Chromosomes and Cancer
Summary
journal-article
Binning metagenomic contigs by coverage and composition
Published by
Nature Methods
Summary
journal-article
Binning metagenomic contigs by coverage and composition
Published by
Nature Methods
Summary
journal-article
An open science peer review oath
Published by
F1000Research
Summary
journal-article
Tipping elements in the human intestinal ecosystem.
Published by
Nature communications
Summary
journal-article
Tipping elements in the human intestinal ecosystem
Published by
Nature Communications
Summary
journal-article
The Open Science Peer Review Oath
Published by
F1000Research
Summary
journal-article
Copy Number Alterations and Neoplasia-Specific Mutations in MELK, PDCD1LG2, TLN1, and PAX5 at 9p in Different Neoplasias
Published by
Genes Chromosomes & Cancer
Summary
journal-article
A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases
Published by
Nucleic Acids Research
Summary
journal-article
A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases
Published by
Nucleic Acids Research
Summary
journal-article
Associations between the human intestinal microbiota, <i>Lactobacillus rhamnosus</i> GG and serum lipids indicated by integrated analysis of high-throughput profiling data
Published by
PeerJ
Summary
journal-article
Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data.
Published by
PeerJ
Summary
journal-article
Cancer gene prioritization by integrative analysis of mRNA expression and DNA copy number data: a comparative review
Published by
Briefings in Bioinformatics
Summary
journal-article
Cancer gene prioritization by integrative analysis of mRNA expression and DNA copy number data: a comparative review
Published by
Briefings in Bioinformatics
Summary
journal-article
RPA: Probabilistic analysis of probe performance and robust summarization
Published by
ArXiv
Summary
journal-article
Targeted resequencing of 9p in acute lymphoblastic leukemia yields concordant results with array CGH and reveals novel genomic alterations
Published by
Genomics
Summary
journal-article
Targeted resequencing of 9p in acute lymphoblastic leukemia yields concordant results with array CGH and reveals novel genomic alterations
Published by
Genomics
Summary
journal-article
The adult intestinal core microbiota is determined by analysis depth and health status
Published by
Clinical Microbiology and Infection
Summary
journal-article
Fully scalable online-preprocessing algorithm for short oligonucleotide microarray atlases
Published by
ArXiv
Summary
journal-article
Global modeling of transcriptional responses in interaction networks
Published by
ArXiv
Summary
journal-article
Homozygous deletions of cadherin genes in chondrosarcoma—an array comparative genomic hybridization study
Published by
Cancer Genetics
Summary
journal-article
Homozygous deletions of cadherin genes in chondrosarcoma-an array comparative genomic hybridization study
Published by
Cancer Genetics
Summary
journal-article
MicroRNA profiling in pediatric acute lymphoblastic leukemia: novel prognostic tools
Published by
Leukemia & Lymphoma
Summary
journal-article
MicroRNA profiling in pediatric acute lymphoblastic leukemia: novel prognostic tools
Published by
Leukemia & Lymphoma
Summary
journal-article
MicroRNA profiling predicts survival in anti-EGFR treated chemorefractory metastatic colorectal cancer patients with wild-type KRAS and BRAF
Published by
Cancer Genetics
Summary
journal-article
MicroRNA profiling predicts survival in anti-EGFR treated chemorefractory metastatic colorectal cancer patients with wild-type KRAS and BRAF
Published by
Cancer Genetics
Summary
journal-article
The adult intestinal core microbiota is determined by analysis depth and health status
Published by
Clinical Microbiology and Infection
Summary
journal-article
MicroRNA microarrays on archive bone marrow core biopsies of leukemias-Method validation
Published by
Leukemia Research
Summary
journal-article
Probabilistic analysis of the human transcriptome with side information
Published by
ArXiv
Summary
journal-article
Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays
Published by
Ieee-Acm Transactions on Computational Biology and Bioinformatics
Summary
journal-article
Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays
Published by
IEEE Transactions on Computational Biology and Bioinformatics
Summary
journal-article
MicroRNA microarrays on archive bone marrow core biopsies of leukemias-Method validation
Published by
Leukemia Research
Summary
journal-article
Intestinal Microbiota in Healthy Adults: Temporal Analysis Reveals Individual and Common Core and Relation to Intestinal Symptoms
Published by
Plos One
Summary
journal-article
Intestinal Microbiota in Healthy Adults: Temporal Analysis Reveals Individual and Common Core and Relation to Intestinal Symptoms
Published by
Plos One
Summary
journal-article
Integrative Analysis of microRNA, mRNA and aCGH Data Reveals Asbestos- and Histology-Related Changes in Lung Cancer
Published by
Genes Chromosomes & Cancer
Summary
journal-article
Integrative Analysis of microRNA, mRNA and aCGH Data Reveals Asbestos- and Histology-Related Changes in Lung Cancer
Published by
Genes, Chromosomes and Cancer
Summary
journal-article
Dependency detection with similarity constraints
Published by
ArXiv
Summary
journal-article
Cancer gene prioritization by integrative analysis of mRNA expression and DNA copy number data: a comparative review
Published by
ArXiv
Summary
journal-article
Array Comparative Genomic Hybridization Reveals Frequent Alterations of G1/S Checkpoint Genes in Undifferentiated Pleomorphic Sarcoma of Bone
Published by
Genes Chromosomes & Cancer
Summary
journal-article
Array Comparative Genomic Hybridization Reveals Frequent Alterations of G1/S Checkpoint Genes in Undifferentiated Pleomorphic Sarcoma of Bone
Published by
Genes, Chromosomes and Cancer
Summary
journal-article
A brief overview on the BioPAX and SBML standards for formal presentation of complex biological knowledge
Published by
ArXiv
Summary
journal-article
Global modeling of transcriptional responses in interaction networks
Published by
Bioinformatics
Summary
journal-article
Unique microRNA profile in Dupuytren's contracture supports deregulation of beta-catenin pathway
Published by
Modern Pathology
Summary
journal-article
Unique microRNA profile in Dupuytren's contracture supports deregulation of beta-catenin pathway
Published by
Modern Pathology
Summary
journal-article
Global modeling of transcriptional responses in interaction networks
Published by
Bioinformatics
Summary
journal-article
CDKN2A, NF2, and JUN Are Dysregulated Among Other Genes by miRNAs in Malignant Mesothelioma-A miRNA Microarray Analysis
Published by
Genes Chromosomes & Cancer
Summary
journal-article
DEPENDENCY DETECTION WITH SIMILARITY CONSTRAINTS
Published by
Proceedings of the IEEE International Workshop on Machine Learning for Signal Processing
Summary
journal-article
DEPENDENCY DETECTION WITH SIMILARITY CONSTRAINTS
Published by
2009 Ieee International Workshop on Machine Learning For Signal Processing
Summary
book
<i>CDKN2A</i> , <i>NF2</i> , and <i>JUN</i> are dysregulated among other genes by miRNAs in malignant mesothelioma-A miRNA microarray analysis
Published by
Genes, Chromosomes and Cancer
Summary
journal-article
Gene expression profiles in asbestos-exposed epithelial and mesothelial lung cell lines
Published by
Bmc Genomics
Summary
journal-article
Gene expression profiles in asbestos-exposed epithelial and mesothelial lung cell lines
Published by
BMC Genomics
Summary
journal-article
Integrating probe-level expression changes across generations of Affymetrix arrays
Published by
Nucleic Acids Research
Summary
journal-article
Associative clustering for exploring dependencies between functional genomics data sets
Published by
Ieee-Acm Transactions on Computational Biology and Bioinformatics
Summary
journal-article
Associative Clustering for Exploring Dependencies between Functional Genomics Data Sets
Published by
IEEE Transactions on Computational Biology and Bioinformatics
Summary
journal-article
Integrating probe-level expression changes across generations of Affymetrix arrays
Published by
Nucleic Acids Research
Summary
journal-article
Associative clustering
Published by
Machine Learning: Ecml 2004, Proceedings
Summary
book-chapter
Associative clustering
Published by
Lecture Notes in Computer Science
Summary
journal-article